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  • Home
  • Research
  • Members
    • Principle Investigator
    • Current and Former Group Members
    • Group Photos
  • Publications
  • Opportunities
    • Postdoc
    • Graduate
    • Undergraduate
    • Research Technicians
  • News and Links
    • SystemScienceRetreat2019
    • Redox Biology Center
    • Dept. of Biochemistry
PUBLICATIONS
Pubmed: https://www.ncbi.nlm.nih.gov/myncbi/limei.zhang.1/bibliography/public/
Google Scholar: https://scholar.google.com/citations?user=AGvsWKwAAAAJ&hl=en
+these authors contribute equally, *corresponding authors, %undergraduate researchers in the Zhang group
  1. 1.     Abeyrathna, S. S., Abeyrathna, N. S., Basak, P., Irvine, G. W., Zhang, L., Meloni, G., “Plastic recognition and electrogenic uniport translocation of 1st-, 2nd-, and 3rd-row transition and post transition metals by primary-active transmembrane P1B-2-type ATPase pumps”, Chem Sci. 2023 (accepted), Available at ChemRxiv, DOI: 10.26434/chemrxiv-2022-q7rcn
  2. Wan, T., Horová, M.+, Khetrapal, V+, Li, S., Jones, C., Schacht, A., Sun, X., Zhang, L-M. “Structural basis of DNA binding by the WhiB-like transcription factor WhiB3 in Mycobacterium tuberculosis”, (2023) J. Biol. Chem, DOI: 10.1016/j.jbc.2023.104777.
  3. Wan, T., Horova, M.+, Beltran, D. G.+, Li, S., Wong, H-X, Zhang, L-M. “Structural insights into the functional divergence of WhiB-like proteins in M. tuberculosis”, (2021) Mol. Cell. 81:1-14
  4. He, X., Chen, Y., Beltran, D., G.%, Kelly, M., Ma, B., Lawrie, J., Wang, F., Dodds, E., Zhang, L., Guo, J., Niu, N. “Functional genetic encoding of sulfotyrosine in mammalian cells”, Nat. Commun., Accepted
  5. Wan, T. +, Li, S.+, Beltran, D. G.%, Schacht, A.%, Zhang, L., Becker, D. F., Zhang, L-M. “Structural basis of non-canonical transcriptional regulation by the σA-bound iron-sulfur protein WhiB1 in M. tuberculosis”, (2020) Nucleic Acids Res. 48:501-516 (in “breakthrough” designation).
  6. Zhang, L-M., "X-ray absorption spectroscopy of metalloproteins", (2019), in Hu, Y. (ed.), “Metalloproteins: Methods and protocols, methods in molecular biology” (pp. 179-195), Springer Science and Business Media, Humana Press, New Jersey. 
  7. Gallenito, M. J., Irvine, G., Zhang, L., Meloni, G. “Coordination plasticity guarantees metal substrate promiscuity in transmembrane primary-active Zn2+ pumps” (2019) Chem. Comm. 55:10844-10847
  8. Jiang, J+. Beltran, D. G.+,%, Schacht, A.%, Zhang, L*, and Du, L*. “Functional and structural analysis of phenazine O-methyltransferase LaPhzM from Lysobacter antibioticus OH13 and one-pot enzymatic synthesis of the antibiotic myxin.” (2018) ACS Chem. Biol. 13: 1003-1012
  9. Li, S., Wu, X., Zhang, L., Shen, Y. and Du, L. “Activation of a cryptic gene cluster in Lysobacter enzymogenes reveals a module/domain portable mechanism of nonribosomal peptide synthetases in the biosynthesis of pyrrolopyrazines.” (2017) Org. Lett. 19: 5010-5013.
  10. Spatzal, T., Schlesier, J., Burger, E. M., Sippel, D., Zhang, L., Andrade, S. L. A., Rees, D. C., Einsle, O. “Nitrogenase FeMoco investigated by spatially resolved anomalous dispersion refinement.” (2016) Nat. Commun.. 7: 10902-10532.
  11. Anderson, J., Cutsail III, G.E., Rittle, J., Connor, B. A., Gunderson, W. A., Zhang, L.*, Hoffman, B. M.* and Peters, J. C.* “Characterization of an Fe≡N-NH2 intermediate relevant to catalytic N2 reduction to NH3.” (2015) J Am. Chem. Soc. 137: 7803-7809.
  12. Mattle, D., Zhang, L., Gourdon, P., Nissen, P., Rees, D. C. and Meloni, G. “A sulfur-based transport pathway for Cu+-ATPases.” (2015) EMBO J. 16: 728-740.
  13. Morrison, C., Hoy, J., Zhang, L., Einsle, O. and Rees, D. C. “Substrate pathways in the nitrogenase MoFe protein by experimental identification of small molecule binding sites.” (2015) Biochemistry 54: 2052-2060.
  14. Zhang, L., Morrison, C., Kaiser, J. T. and Rees, D. C. “Nitrogenae MoFe-protein from Clostridium pasteurianum at 1.08 Å Resolution: Comparison to the Azotobacterer vinelandii MoFe-protein.” (2015) Acta Cryst D 71: 274-282.
  15. Meloni, G.+*, Zhang, L.+* and Rees, D. C.* “Transmembrane Type-2-like Cu2+ site in the P1B-3-type ATPase CopB: implications for metal selectivity.” (2014) ACS Chem. Biol. 9(1): 116-121.
  16. Zhang, L., Kaiser, J. T., Meloni, G., Yang, K. Y., Spatzal, T., Andrade, S. L. A., Einsle, O., Howard, J. B. and Rees, D. C. “The sixteenth iron in the nitrogenase MoFe-protein.” (2013) Angew. Chem. Int. Ed. Engl. 52: 10529-10532.
  17. Moret, M. E., Zhang, L. and Peters, J. C. “A polar copper-boron one-electron bond.” (2013) J. Am. Chem. Soc. 135: 3792-3795.
  18. Pushie, J.M., Zhang,  L., Pickering, I. J. and George , G. N. “The fictile coordination chemistry of cuprous-thiolate sites in copper chaperones.” (2012) BBA - Bioenergetics. 1817: 938-947.
  19. Spatzal, T., Aksoyoglu, M., Zhang, L. Andrade, S. L.A., Schleicher, E., Weber, S., Rees, D. C. and Einsle, O. “Direct evidence for interstitial carbon in nitrogenase FeMo cofactor.” (2011) Science. 334:940-940.
  20. Ma, Z., Cowart, D. M., Ward, B. P., Arnold, R. J., DiMarchi, R. D., Zhang, L., George, G. N., Scott, R. A. and Giedroc, D. P. “Unnatural amino acid substitution as a probe of the allosteric coupling pathway in a mycobacterial Cu(I) sensor.” (2009) J. Am. Chem. Soc. 131:18044-18045.
  21. Zhang, L., Lichtmanneger, J., Summer, K. H., Webb, S., Pickering, I. J. and George, G. N. “Tracing copper-thiomolybdate complexes in a prospective treatment for Wilson’s disease.” (2009) Biochemistry 48:891-897.
  22. Bewer, B., Zhang, H., Zhu, Y., Zhang, L., George, G.N., Pickering, I. J. and Chapman, D. “Development of a combined K-edge subtraction and fluorescence subtraction imaging system for small animals.” (2008) Rev. Sci. Instrum. 79:085102-1-085102-3.
  23. Zhang, L., Pickering, I. J., Winge, D. R. and George, G. N. “X-ray absorption spectroscopy of cuprous-thiolate clusters in Saccharomyces cerevisiae metallothionein.” (2008) Chem. Biodivers. 5:2042- 2049.
  24. Zhang, H., Zhu, Y., Bewer, B., Zhang, L., Korbas, M., Pickering, I. J., George, G. N., Gupta, M. and Chapman, D. “Comparison of iodine K-edge subtraction and fluorescence subtraction imaging in an animal system.” (2008) Nucl. Instrum. Methods Phys. Res. A. 594: 283-291.
  25. Chen, X., Hua, H., Balamurugan, K., Kong, X., Zhang, L., George, G. N., Georgiev, O., Schaffner, W. and Giedroc, D. P. “Copper sensing function of Drosophila metal-responsive transcription factor-1 is mediated by a tetranuclear Cu(I) cluster.” (2008) Nucleic Acids Res. 36 (9):3128-3138.
  26. Zhang, L., Nelson, K. J., Rajagopalan, K.V. and George, G. N. “Structure of molybdenum center in trimethylamine N-oxide reductase from E. Coli.” (2008) Inorg. Chem. 47 (3): 1074-1078.
  27. Rigby, K., Zhang, L., Cobine, P. A., Tzagoloff, A., George, G. N. and Winge, D. R. “Characterization of the cytochrome c oxidase assembly factor Cox19 of Saccharomyces cerevisiae.” (2007) J. Biol. Chem. 282 (14): 10233-10244.
  28. Coyne, H. J., Ciofi-Baffoni, S., Banci, L., Zhang, L., George, G. N. and Winge, D. R. “The characterization and role of zinc binding in yeast Cox4.” (2007) J. Biol. Chem. 282 (12): 8926- 8934.
  29. Liu, T., Ramesh, A., Ward, S. K., Zhang, L., Ma, Z., George, G. N., Talaat, A. M., Sacchettini, J. C. and Giedroc, D. P. “CsoR is a novel Mycobacterium tuberculosis copper-sensing transcriptional regulator.” (2007) Nature Chem. Biol. 3 (1): 60-68
  30. Jiang, D.T., Chen, N., Zhang, L., Malgorzata, K., Wright, G., Igarashi, R., Beauregard, D., Kirkham, M. and McKibben, M. “XAFS at Canadian Light Source.” (2007) AIP Proc. (XAFS13) 882:893-895.
  31. Doonan, C. J., Zhang, L., Young, C. G., George, S. J., Deb, A., Bergmann, U., George G. N. and Cramer, S. P. “High-resolution X-ray emission spectroscopy of molybdenum compounds.” (2005) Inorg. Chem 44 (8): 2579-2581.
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